Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MSLFFEEWGPILW---QGFLETLTMTGITLVISLAIGLPLGVFLTLTRKGGQSENLVAYSILNWVINILRSLPFIILLFLMIPVTRFVVGTTIGIQGVIMPLVVFTAPYIARLMESALLEVDRGVVEAYQAMGISTPKIIWSVVIREARSGIVLGLTIATIGLIGATAMAGLVGAGGLGTIAYQYGFQRFEPTVMYTTIIILIIMVQALQSFGNFLSRRLKKD
3TUJ Chain:A ((4-216))
---------PMMWLLVRGVWETLAMTFVSGFFGFVIGLPVGVLLYVTRPGQIIANAKLYRTVSAIVNIFRSIPFIILLVWMIPFTRVIVGTSIGLQAAIVPLTVGAAPFIARMVENALLEIPTGLIEASRAMGATPMQIVRKVLLPEALPGLVNAATITLITLVGYSAMGGAVGAGGLGQIGYQYGYIGYNATVMNTVLVLLVILVYLIQFAGDRIVRAVTR-
General information:
TITO was launched using:
RESULT:
Template:
3TUJ.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -149846 for 1485 contacts (-100.9/contact) +
2D Compatibility (PS) -19519 + (NN) 7443 + (LL) 732
1D Compatibility (HY) 3200 + (ID) 950
Total energy: -158940.0 ( -107.03 by residue)
QMean score : 0.054
(partial model without unconserved sides chains):
PDB file :
Tito_3TUJ.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3TUJ-query.scw
PDB file :
Tito_Scwrl_3TUJ.pdb
: