Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MDWRKTQMIFIVTLLILNVFLAVIFFNKQLSDDPDTLGNETLEERLKADNISHPDLSTKPTSGSIFTTERAAFTTKDVSDLTGQAITLKDNNKQIYSVLQTPVKAGKKGSNPEFQKFMESDVYRGESYQFWNYDKDARTLTFNQLINNNMVLFDEAGQITFYLDQDDRVISYEQTWMSKQDDLKDKTNLMSATDALEAVYQHGELKQDSDVVSATFGYYTTVQLPSGNVYFPVWCFEVKHSGETNYVLVNAKDEQVINQSENKSTTEPGAELSSRQKAK |
| 4NS4 Chain:A ((29-75)) | -----------------------------------------------------------------NTTQKIIQYERSKSDLTTQSFTLSSGDKIVYA-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4NS4.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 4654 for 124 contacts (37.5/contact) +
2D Compatibility (PS) -3466 + (NN) 78 + (LL) 15596
1D Compatibility (HY) -800 + (ID) 550
Total energy: 15512.0 ( 125.10 by residue)
QMean score : 0.187
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