Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MTISERQRSLLEKLNDSQKTVTAKALSEMLGVSSKTVRNDIMQINQSFSSTIIASKAGKGYFLMPNEQLSQMNLTKNNENLHFELLRHIIEQDHTNFYDLADQFFISESTLARIIKELNIVIAEKDESLCIIRKNNELLTEGGEEEKRRIFNLFLNQEIENHQLSLDKYADYFDYCNLKQLSELIIAYHKKHEFFMNDFSTISFILHIAVLIERISMGSYIERTALLEQDKTSLEMAAHLAETLEKELQINIPTQELSYIARLYSGKLTTTSTIDAQVFGSVVTRLLEAVDQNFHIDFSADEKIATYLVAHISALYKRANHKQYLTNPLTEELKNKFPFIYNVSVYASAFIQKELAITFPDDEIAYIALHFLSASETINHGKKRKILLVTPYGAGSQRLIHNQLKKIPDFSIDLLVSQSIFDIKQFTLDKEIHLILTAEPLNLTTDIPVYHYDLLLAESDLQKIKHILETKQKTESISRKFFKKELFFPKQNFKSKEETITFLCEQLTAFDYCAPDYVAKVFEREQLSSTCYGNYYAIPHAIQRSAKKNAVAVCSLDKPIDW---GGNRVKLVLLLTMKEERDNSFEELFGQLVTILNERSFVKKLAKQEDFQQFIELCEQKTLDS |
3URR Chain:A ((50-150)) | ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LFARERLGSTGLGEGVAIPHGRIKGLKHPLAAFVRLAEPIPFEAPDGQPVSLLIFLLVPEQATQAHLEILSEIAQLLSDRDTRERLHTEPDRDELHRLLTQ----- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3URR.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -59396 for 616 contacts (-96.4/contact) +
2D Compatibility (PS) -10697 + (NN) -5636 + (LL) 43280
1D Compatibility (HY) -6800 + (ID) 1400
Total energy: -40649.0 ( -65.99 by residue)
QMean score : 0.486
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