Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MLSTAKERQLKIVNRLKVEQFMRIIDLVEFVNYSEATVKRDLVELEKEGLVRRTRGGAMIIDNKKIDLPYLMKMNERSNETSKIRIADIAKSLIRDDMVIFLDSSSTSLHLIDVLSKFDGLQIITNGVMTASMLSEFTNARVSILGGSILTKRYTVNGAKAYNDALTYNADIAFVSCRGIDYDKGATETHEGEALIKQAFRRQSSSLVLLVTEEKVGHKFMHQSLACHDIDYLITDFKLDPDVEEQFKTHQITCLY |
3CJN Chain:A ((50-100)) | -LSTAKMRALAI---LSAKDGLPIGTLGIFAVVEQSTLSRALDGLQADGLVRR----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3CJN.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -19767 for 328 contacts (-60.3/contact) +
2D Compatibility (PS) -5272 + (NN) -646 + (LL) 15096
1D Compatibility (HY) -3200 + (ID) 1050
Total energy: -14839.0 ( -45.24 by residue)
QMean score : 0.761
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