Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MKVQRIQAIENLIHEKGSISLDDLCEQFNVSKNTVRRDIAKLLQKNTIQKVYGGVVSVYNNPEEIRPFENRDTENHLEKQLIGKAAADFIEENDLIFIDSGTTTSCLAAALPTDKEITIITNSLDVINFASE----MDNVKLIVIGSTFKPSTKSFVGVENWGFFEKYNITKAFMAATALSTAHGVMNSDILEYEIKRHMMEKATAKFLLVDHTKVDKSALLTYGELAEFDWLVTSKDIAGGCLGYCEDVGVLVRLV |
4UW0 Chain:A ((200-310)) | ---------------------------------------------------------------------------------------------------------------PVPRPMYLVSNHRVLINDFNQPFQHWQNQPYAGAGLAHKRSRRYFFG-------EDY-VCKFFY----YDMPHGILTAE--ESQRNKHELHNEI-KFLTQPPAGFDAPAVLAHGENAQSGWLVMEK-------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4UW0.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -15267 for 622 contacts (-24.5/contact) +
2D Compatibility (PS) -11569 + (NN) -492 + (LL) 10748
1D Compatibility (HY) -4000 + (ID) 1550
Total energy: -22130.0 ( -35.58 by residue)
QMean score : 0.182
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