Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MAKPIEEIGEEIGAKVEKVARKTGNVAGTAAKLSVYSSIWAVKTGVNKTRAFAQGFKQGWSGK
4K6A Chain:A ((164-209))
---------EEVCARQIDAVLKTQGAAAFEGAVIAYEPVWAIGTGKSATPAQAQA--------
General information:
TITO was launched using:
RESULT:
Template:
4K6A.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) 6185 for 194 contacts (31.9/contact) +
2D Compatibility (PS) -4767 + (NN) 163 + (LL) 884
1D Compatibility (HY) 0 + (ID) 750
Total energy: 1715.0 ( 8.84 by residue)
QMean score : 0.256
(partial model without unconserved sides chains):
PDB file :
Tito_4K6A.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4K6A-query.scw
PDB file :
Tito_Scwrl_4K6A.pdb
: