Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKKVLLAILSMVLLLSLAACGGSSDSSKDKNGKEEIVMWGSWSGDQ-IKQLEKQIDSYNKSQDKYKVKY--VMQENVEEKLLTGIAGGELPDIIMWDRYQTALYAPKGV-LEPLDKLVKEDNLKMDDFYEESVKEMTYSDKLYGLPLLNDNRILFYNKKLLQEAGV---KPPTTWDELATAAQKTTKWDGNKMTQAGMSLQ----DVGLFNLYLMQAGGELVTSDNKETAFNSEQGLEVLNYWDKMQND----LKVYQRGFDDGSDAFAAGKEAMTYNGPWALADYNKVEDLDYGV-VEPPKGPNGDKGAIMGGFGLVMPKQAEHKDGAWDFMKWWTTKPENGVEFAKISGWLPANK--IAAEDEYFTKDPNYSVFVNTMKYAKIRPTVAGYADVEGLAMKPQFEKFMNGNISAEKALSQAEKEGNQILKEERDK |
| 4QRZ Chain:A ((31-401)) | -----------------------------------------WSLDRDIQPAPNLIKEFNALNNGIKIEYRQLQFDDVVSESMRAYSTGNAPDIIAIDNPNHAMFASRGAFLDVTDMIAKSDVIKTENYFPGPLKSVTWDGKYFGVPKATNTIALYYNKDLFKAAGLDAAKPPQTWDELVDAARKLTNPAKNVY---GISFSAKANEEGTFQ-FLPWAQMAGATYKN----INTDGAVKALETWKTLLDEKLASPDTLTRSQWDSTATFNAGNAAMAISGPWEIDRMLKDAKFDWGVTLLPVPTPDAPRSSAMGDYNWAIFSKTKHPAEAFKAIEFFASKDK---DMFKNFGQLPARSDIPVPPTGNALKDEALKTFVEQLKYAQPRGPSPEWPKISK-AIQDAIQGALSGQMTPKAALDQAAEK----------- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 4QRZ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -47133 for 3049 contacts (-15.5/contact) +
2D Compatibility (PS) -37606 + (NN) -14669 + (LL) 4476
1D Compatibility (HY) -16800 + (ID) 4950
Total energy: -116682.0 ( -38.27 by residue)
QMean score : 0.438
|
|
|