Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceLKKYPLIAIVLLALVGIGLLMGGFKSFFILIVSVLIGTLIFTLLLRLFTNRKTDSNYQKAVKQSKNMHNPKKKTKKKRKSSFKVIDGGKK
3U5M Chain:A ((112-155))-------------------------------------------------------NYYKIIKKPMDLSTVKKKLQKKHSQHYQIPD----


General information:
TITO was launched using:
RESULT:

Template: 3U5M.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) 12519 for 112 contacts (111.8/contact) +
2D Compatibility (PS) -2961 + (NN) 1446 + (LL) 5116
1D Compatibility (HY) -1600 + (ID) 500
Total energy: 14020.0 ( 125.18 by residue)
QMean score : 0.324

(partial model without unconserved sides chains):
PDB file : Tito_3U5M.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3U5M-query.scw
PDB file : Tito_Scwrl_3U5M.pdb: