Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MQKNDDLLRERRKDEHVALGVKQNEQLAPSS--LKDIQLIGTSIPRYNVKDIDLTTTIFGKNVPFPFYINAMTGGSRHTKKINAELAEIAREVAIPMAVGSQSAALKNSSLIDTYNIVREINPNGMILANVS-PEVAIQDGLQ----AIEMLEANALQIHINPAQELVMQEGDRSFS-HWLTRIEEYVKLSPVPIVVKEVGFGMTRETVKTLADIGVQTVDLAGKGGTNFAQIE--NDRRR-----DQAYDFLLDWGISTGQALIDMQHQDAPKIAYLASGGIRNPLDIIKALALGADSVGMAGQIIYSL--KKEGVTKTIEKLELWKEQLRGLFVLANAKNIAELKTTPLIVSGELAKWGTLREINLVKLANRK |
| 2ZRU Chain:A ((9-358)) | -------------VEHVEIAAFENVDGLSSSTFLNDVILVHQGFPGISFSEINTKTKFFRKEISVPVMVTGMT---NELGRINKIIAEVAEKFGIPMGVGSQRVAIEKAEARESFAIVRKVAPTIPIIANLGMPQLVKGYGLKEFQDAIQMIEADAIAVHLNPAQEVFQPEGEPEYQIYALEKLRDISKELSVPIIVKESGNGISMETAKLLYSYGIKNFDTSGQGGTNWIAIEMIRDIRRGNWKAESAKNF-LDWGVPTAASIMEVRY-SVPDSFLVGSGGIRSGLDAAKAIALGADIAGMALPVLKSAIEGKESLEQFFRKIIF---ELKAAMMLTGSKDVDALKKTSIVILGKLKEWAEYRGINL------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2ZRU.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -175024 for 2901 contacts (-60.3/contact) +
2D Compatibility (PS) -35476 + (NN) -11480 + (LL) 1888
1D Compatibility (HY) -27600 + (ID) 6100
Total energy: -253792.0 ( -87.48 by residue)
QMean score : 0.542
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