Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | LETWITSIMADFGYIGIFVLIMVENLFPPIPSEIILTFGGFMTTVTSLNVVMVIIVATLGSVVGAILLY--KVASYFGKERLTKIVLKYGRILRLKESDIERAENFFLKYGSWAVFLCRMIPLIRSLISIPAGMTKMKMSKFLILTTAGSLLWNTVLIGLGAMLGESWSEIVVFMDSFSTIIYSIIAILVVVGLGFFFRARFKKTLDEE |
2L8D Chain:A ((17-64)) | ----------------------------------------------------------MGRWPGSVLYYEVQVTSYDDASHLYTVKYKDGTELALKESDIRLQSSF------------------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2L8D.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -13449 for 232 contacts (-58.0/contact) +
2D Compatibility (PS) -4837 + (NN) 1018 + (LL) 15148
1D Compatibility (HY) -4000 + (ID) 900
Total energy: -7020.0 ( -30.26 by residue)
QMean score : -0.052
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