Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MTNKVPASFNKWIEKVKTTFPENEKLHRMFEKCFTNTYTTTLQETEEGLPFVITGDIPAMWLRDSTSQIRPYLIVAEEDEEMATVIENLVKLQTKCILHDPYANAFNKSANGAGF-QNDKTAMTNLVWERKYEIDSLCYPIQLAYLLWKSTNRTGHFTEEFRKALHQIIEVFKIEQKHTEQSPYRFERENVRQSDTLNNNGKGTDVSYTGMSWSGFRPSDDACMYGYLVPSNMFLVVVMDYVQEI-AATFYPEDKELPKESSDLRKEVAAGIETYAKQVHPYYGDVYAYEVDGTGRKLFMDDANVPSLLAATYLGFCEKTDPAYQATRKLILSRENPYFVEGSVLTGIGSPHTPDHYVWPIALSIEGLTAETEAEKQAILEMLIAGDGGTDYMHEGVNASNPAEFTRDWFAWSNAMFSEFVLSLCGVYVKGSPLSK |
3QRY Chain:B ((10-425)) | ----------EWLDEVAERAKDYPEWVDVFERCYTDTLDNTVEILEDGSTFVLTGDIPAMWLRDSTAQLRPYLHVAKRDALLRQTIAGLVKRQMTLVLKDPYANSFNIEENWKGHHETDHTDLNGWIWERKYEVDSLCYPLQLAYLLWKETGETSQFDEIFVAATKEILHLWTVEQDH-KNSPYRFVRDTDRKEDTLVNDGFGPDFAVTGMTWSAFRPSDDCCQYSYLIPSNMFAVVVLGYVQEIFAALNLADSQSVIADAKRLQDEIQEGIKNYAYTTNSKGEKIYAFEVDGLGNASIMDDPNVPSLLAAPYLGYCSVDDEVYQATRRTILSSENPYFYQGEYASGLGSSHTFYRYIWPIALSIQGLTTRDKAEKKFLLDQLVACDGGTGVMHESFHVDDPTLYSREWFSWANMMFCELVLDYLDI--------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3QRY.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -208265 for 3732 contacts (-55.8/contact) +
2D Compatibility (PS) -44596 + (NN) -28671 + (LL) 736
1D Compatibility (HY) -43600 + (ID) 10350
Total energy: -334746.0 ( -89.70 by residue)
QMean score : 0.472
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