Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MNYEMISDYKDNKMYRDSFNRLAESTFDINF-EEWYRDGFWNDKYICYSYIDDNKVIANVSINKMNLIYQGEDYRALQIGTVMTHPDYRGQGLAKKLLEHV--IAKYEDQYDFLYL---FANDTVLDFYPKFGFERVEESSFTVDACSLKRESSNLKKLNPGNKTDFQLISRIVSEKTPLSNILDVRESEDLLMFYVLIALKNELYYIEELDVIVLMEQEDADLYVLDILSTKKLDVVEVLRYLPIKKIETIHLLFTPEKSKYIDAAHIIETEDMLFVRPNILTNENYFLFPATSHA |
2PSW Chain:A ((22-134)) | --------------------RLNQVIFPVSYNDKFYKDVLEVGELAKLAYFNDIAVGAVCC-----RVDHSQNQKRLYIMTLGCLAPYRRLGIGTKMLNHVLNICEKDGTFDNIYLHVQISNESAIDFYRKFGFEIIE--------------------------------------------------------------------------------------------------------------------------------------------------------------- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 2PSW.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -67206 for 686 contacts (-98.0/contact) +
2D Compatibility (PS) -11721 + (NN) -7887 + (LL) 14756
1D Compatibility (HY) -9200 + (ID) 1650
Total energy: -82908.0 ( -120.86 by residue)
QMean score : 0.496
|
|
|