Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | LKSKLELLFTKISHVMNVWQATFFAAVSWVLALITIQTIYLWSISIRDDSLFLREVSQAIVQLFGTNKYTRIMQSFWMMSLKFLIIFLIACLFFAFFYRLMRQRILKKQLRTINFALNDGKPVDTESFVPEIQELERNIENMRERQKKLMQQEEQAQQARNDLITNVSHDLRTPLTSILGYLSYIHEDRYR-DEIELRYYTELVYGKARHLHKLIDDLFSYTRLDSVDYQLKKDELDIVELLRQLVAEYDGRAAERNMQIVEHFDAN-KLIIGG--DGNQIMRLFENLFSNALRYGE---GNKQIDVSAKKEDNMAVVRVTNYGEEIPNVDLPYLFERFYKVDKNRT--TTGTGLGLAIAKSIVEKHGGIVTAESK-KRQTSFIVKLPLI |
| 4JAS Chain:A ((13-246)) | --------------------------------------------------------------------------------------------------------------------------------------------------------LKRIDRMKTEFIANISHELRTPLTVIKGYAEMIYNSLGELDLSTLKEFLETIIEQSNHLENLLNELLDFSRLERKSLQINREKVDLCDLVESAVNAIKEFASSHNVNVL--FESNVPCPVEAYIDPTRIRQVLLNLLNNGVKYSKKDAPDKYVKVILDEKDGGVLIIVEDNGIGIPDHAKDRIFEQFYRVDSSLTYEVPGTGLGLAITKEIVELHGGRIWVESEVGKGSRFFVWIP-- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4JAS.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -90008 for 1582 contacts (-56.9/contact) +
2D Compatibility (PS) -24127 + (NN) -5874 + (LL) 16620
1D Compatibility (HY) -18800 + (ID) 3550
Total energy: -125739.0 ( -79.48 by residue)
QMean score : 0.520
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