Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | -------------------------MSFIIRKGKILALLIAFLVINQLVPILAVWLLKNHYQTPFTSILLIGLELLIIALFLYYAKVKQIIRWKALL--------TRKALVTIFLGWLSLRV---PQIIGYLIMTMQGVKDTANQTVIMELTKQLPLALMLIFTIIGA------------PIMEEIIFRYIIPKELFAKHQKWGFVIGTLAFALIHSPSDIGSFIIYAGM-GAILSFVYYKTEHLEYSI----------------MVHFINNALAYSVLISTMMNN |
| 4UX8 Chain:C ((25-343)) | DRLDCVKASDQCLKEQSCSTKYRTLRQCVAGKETNFSLTSGLEAKDECRSAMEALKQKSLYNCRCKRGMKKEKNCLRIYWSMYQSKGNNCLDAAKACNLDDTCKKYRSAYITPCTTSMSNEVCNRRKCHKALRQFFDKVPAKHSYGMLFCSCRDIACTERRRQTIVPVCSYEERERPNCLSLQDSCKTNYICRSRLADFFTNCQPESRSVSNCL--KENYADCLLAYSGLIGTVMTPNYVDSSSLSVAPWCDCSNSGNDLEDCLKFLNFFKDNTCLKNAIQAFGNG |
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General information:
TITO was launched using:
| RESULT:
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Template: 4UX8.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -191420 for 1477 contacts (-129.6/contact) +
2D Compatibility (PS) -21769 + (NN) 4634 + (LL) 248
1D Compatibility (HY) -3200 + (ID) 1450
Total energy: -212957.0 ( -144.18 by residue)
QMean score : 0.166
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