Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MKNKKILFGTGLAGVGLLAAAGYTLTKKVTDYKRQQITQTLREFFSQMGDIQVF------YFNEFESDIKMTSGGLVLEDGRIFEFIYRQGVLDYVEVSK
1YON Chain:A ((221-288))
----------------------HTSAEDLRDYVMQVIDATAENISSMLQDIRALRHTEIDYINGFLLRRARAHGIAVPENTRLFEMVKRKESEY------
General information:
TITO was launched using:
RESULT:
Template:
1YON.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) 2819 for 283 contacts (10.0/contact) +
2D Compatibility (PS) -6268 + (NN) 3456 + (LL) 1724
1D Compatibility (HY) -2000 + (ID) 950
Total energy: -1219.0 ( -4.31 by residue)
QMean score : -0.085
(partial model without unconserved sides chains):
PDB file :
Tito_1YON.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1YON-query.scw
PDB file :
Tito_Scwrl_1YON.pdb
: