Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MIKIYDTMTRSLQDFIPLNEGKVNMYVCGPTVYNYIHIGNARSVVAFDTIRRYFEYCGYQVNYISNFTDV---DDKIIKGAAEAGMDTKSFSDKFISAFMEDVAALGVKPATKNPRVIDYMDEIIDFVKVLVDKEFAYEANGDVYFRVSKSHHYAKLANKTLEDLEIGASGRVDGEGEIKENPLDFALW---KSAKSGEVSWESPWGKGRPGWHIECSVMATEILGDTIDIHGGGADLEFPHHTNEIAQSEAKTGKTFANYWMHNGFVNVDNEKMSKSLGNFITVHDML-KSVDGQVIRFFLATQQYRKPVNFTEKAVHDAEVNLKYLKNTFNL------PIQENANDEELEQF--------VKAFQEAMDDDFNTANGITVIFEMAKWINSGHYTSKVKETLAELL-EIFGIVFQEEVL----------DADIESLIEQRQEARANRDFATADRIRDELAKQGIKLLDTKDGVRWTRD |
| 3SP1 Chain:A ((23-490)) | ILKLYNTRTKDFSELT--NFENVKVYACGPTVYNYAHIGNFRTYIFGDLLIKTLRFLGYKVNYAMNITDIGHL------------LTVYEISEFFTEAFFNDCRKLNIVYPDKVLVASKHIPIMIEVVKILEEKKITYFSNGNVYFDTSCFKSYGEMAG-------------------FKRNKTDFVLWFTNSK-----MKWDSPWGFGYPSWHLECAAMNLEYFKDALDIHLGGVDHIGVHHINEIAIAECFLNKKWCDVFVHGEFLIMD----------FITVKDLEDQNFSPLDFRYLCLTSHYRNQLKFSLDNLQASKIARENLINKLSYFYESLDPVDLNTLNKDLKNFGFSVEKEYYDSFVEKISFDLNVAQGLALLWEIIKSDNLS-FVSKLR--LAFIFDEIMSLNLREEILKNLQNHDVVIDENMKALIEERRIAKCEKNFKRADEIRDFFAKKGFVLV----------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3SP1.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -196372 for 3028 contacts (-64.9/contact) +
2D Compatibility (PS) -40892 + (NN) -10425 + (LL) 2124
1D Compatibility (HY) -38000 + (ID) 6850
Total energy: -290415.0 ( -95.91 by residue)
QMean score : 0.488
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