Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MIKTKFSDPLEQLAKKRKRKTLFKTVVLALITVLLVVGIAFKGFTYLTSKNGQKTYHNFELLSEIAYPNISYDSLYYQPSGQFTGKVHADRFKDIDGVQIPYSSFEENYSISGTFGTNADEKSEKNGLYDRGTRQKVPQFFNKNVKYKKGEAKTTPTNDLKYVNKLNNDLIEIAITFDKSYSYKEIKTMIPNNIKQNWLWIGTSTELDTSYWPTKYQFGTDPETLNTPQIFIDKIKENLKGNSKVYFNNINIYSDLEKYAKKYDKVNNSDKLKFSGIILTGKAENFKQLKEKEWVHASSIGANIEYKPYYKLDKE |
4Q6P Chain:A ((299-371)) | ---------------------------------------------------------------------------------------------------------------------------------------KIPQIPIESNAYIVGLVKNKQEVFLKYGNKLMTRLSPFYIEFDP--SLEEVKMQIDN--KDQMVKIGSVVEVKESFYIHAMDNIRANVIGFSVSNENKPNEAGYTIKFKDFQKRFSLDKQERIYRIEFYKNNAFSGMILVKFV------------------------------------- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 4Q6P.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) 16981 for 320 contacts (53.1/contact) +
2D Compatibility (PS) -7553 + (NN) -392 + (LL) 9636
1D Compatibility (HY) -5200 + (ID) 1300
Total energy: 12172.0 ( 38.04 by residue)
QMean score : -0.030
|
|
|