Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MKKECRDFYRQIQHTYNDIAVR-EDAVLSSILLSASNGLIKT-SDVPRVAYELTQQLENNEIEKSFESLATVKELKKSAKKLSERYEQNKVTTGLLSKVFGNH
2K19 Chain:A ((18-91))
--------ENIITDLLDDLKTDLDNESLKKVLENYLEELKQKSASVPLILSRMNLDISKAIRNDGVTLSDYQSKKLKELTSISNIRYGY--------------
General information:
TITO was launched using:
RESULT:
Template:
2K19.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -4579 for 450 contacts (-10.2/contact) +
2D Compatibility (PS) -7252 + (NN) 791 + (LL) 1604
1D Compatibility (HY) -1200 + (ID) 400
Total energy: -11036.0 ( -24.52 by residue)
QMean score : 0.449
(partial model without unconserved sides chains):
PDB file :
Tito_2K19.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2K19-query.scw
PDB file :
Tito_Scwrl_2K19.pdb
: