Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MFKKIILSIATIAATASLAVSVQASEKVELKVATDSDTAPFTYQKD-GKFKGYDVDVVKAVFKGSKYKVTFKTVPFDTISTGIDAGKFDLSANDFSYNKERAEKYLFSDPISRSNYAVVGKKGSH-YKSLSDLSGKSTEVLSGVNYAQVLENWNKNHPNKKPIKIKYVSGTTGVTSRLKNIESGKIDFILYDAISSDYIVKD-QSLNLSVSPLKGKIGNNKDGLEYLLLPKDKKGKTLQKFINKRIKVLKENGTLARLSKQYFGGDYVSNIDK |
| 4G4P Chain:A ((18-243)) | ----------------------QGMEGKKYTIGTDLTFAPFEFQDSKGKYIGIDVDLLDAIAKDQDFEVDLKPLGFDSAVQAIQSKQIDGMIAGMSITDERKKSFDFSDPYFDSGLQLAVKKGNDKIKSYDDLKGKTVAAKVGTESANFLE----KNKEKYDYTIKNFDDATGL---YKALENGEADAIVDDYPVLGYAVKNGQKLQL--------VGDKETGSSYGFAVKKGQNPELIKKFNAGLKNLKDNGTYDKILNNYLA--------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4G4P.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -68285 for 1869 contacts (-36.5/contact) +
2D Compatibility (PS) -23975 + (NN) -9160 + (LL) 2956
1D Compatibility (HY) -12400 + (ID) 3700
Total energy: -114564.0 ( -61.30 by residue)
QMean score : 0.471
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