Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MFLEIAKVYLQGLGLASITVILVGIIWVFWRAKKNIDKTARERQSVLYDVLLIALMTAPILAFAFVAIILMIKA
3L1L Chain:A ((411-440))
-------------MWSFVTLMVITAMYALNYNRLHKNPYPLDA-------------------------------
General information:
TITO was launched using:
RESULT:
Template:
3L1L.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -7245 for 102 contacts (-71.0/contact) +
2D Compatibility (PS) -3015 + (NN) -459 + (LL) 5896
1D Compatibility (HY) -2000 + (ID) 50
Total energy: -6873.0 ( -67.38 by residue)
QMean score : 0.305
(partial model without unconserved sides chains):
PDB file :
Tito_3L1L.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3L1L-query.scw
PDB file :
Tito_Scwrl_3L1L.pdb
: