Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKNKKNNYDLMYFIPLVFLIYPIGGILYYHYPFWTLFFTLAFVGAYLYSVIIRGESKYHMIAWSTMLTYIFYMTIFINSGFIWYIYFLSNLLVYRFRDKLKSFRFISFACTLATVVFLCFFKASDFGDRIMFLIVPIFCIGYMWIAIENRNSEEQREKIAEQNQYINILSAENERNRIGRDLHDSLGHTFAMMTLKTELALKLLEKRNYDKVQKELSELNHISHQSMSEVRQIVSNLKYRTVVEEIDELYRLFQLSNIKLTVVNKLETSQLSPVTQSTITMILKELSNNIVKHAEADSVELSLVRQGATINIEMIDNGC--GFTNLDGDEFHSIQERLTIVEGTLTILSRSKPTHIQVVLKEV |
| 3EHH Chain:A ((16-201)) | ------------------------------------------------------------------------------------------------------------------------------------------------------------------NERIAELVKLEERQRMARDLVDTLGQKLSLMGLKSDLARKLIYK-DPEQAARELKSVQQTARTSLNEVRKIVSSMKGIRLKDELINIKQILEAADIMFIYEEEKWPENISLLNENILSMCLKEAVTNVVKHSQAKTCRVDIQQLWKEVVITVSDDGTFKG------HGLLGMRERLEFANGSLHIDTENGTKLTMAIPN-- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3EHH.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -56122 for 1144 contacts (-49.1/contact) +
2D Compatibility (PS) -18802 + (NN) -3507 + (LL) 15412
1D Compatibility (HY) -12000 + (ID) 2600
Total energy: -77619.0 ( -67.85 by residue)
QMean score : 0.496
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