Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKKLIWSHLFAIVSILGIWYYHVKIDHLMVILLASVLSLEMGFIAYYSRNIFIRLLASLGLLFFYPQSLGIFLSLVSLEWSTKDIWQSNHFMQYMAYLLAILFIISSALLSLKLLVNAYDISKRYQLATVIPVMLFSSFAFCLEKSGSLGLEGIILNPSAFFNGIQTNMANLDFKALSCLFLVQLLLWGILMED |
| 3BMA Chain:A ((339-356)) | ----------------------------------------------------------------DGGEPFFMKDTIHLGWLGWLAFDKAVDPFLSNPTPAPTYHLNERFFSKDWATYDGDVKEF---------------------------------------------------------------------- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 3BMA.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -4240 for 73 contacts (-58.1/contact) +
2D Compatibility (PS) -1737 + (NN) 907 + (LL) 14008
1D Compatibility (HY) -400 + (ID) 100
Total energy: 8438.0 ( 115.59 by residue)
QMean score : -0.244
|
|
|