Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKVKLFAIHLFFIVISFGIKYYHLQGPNLIWNMTLALIALDFAYLTSLFKKKILIGLFALAWFFFYPNTFYMLTDIIHMHFVGDVLYNKTNLILYILYVSSILFGFLSGIESFSVIMRKFRISNIFLRWGIIGIVSFVSSFGIHIGRYARLNSWDILTKPQVVINELLAVPSRDSFHFILGFTFLQVLCLIFMDYSAGKKLEK |
| 1AVO Chain:B ((222-236)) | --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AYAVLYDIILKNFEK |
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General information:
TITO was launched using:
| RESULT:
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Template: 1AVO.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -443 for 50 contacts (-8.9/contact) +
2D Compatibility (PS) -1500 + (NN) 18 + (LL) 17344
1D Compatibility (HY) -400 + (ID) 150
Total energy: 14869.0 ( 297.38 by residue)
QMean score : 0.340
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