Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MKLNKIILSTAALTALFLGYNSVTADTYNNYQPHRSNNMDLTEEYNYNNQIELQERIKKLNIPFKEKLALLRKVKSRQDSYVLDTLRKEVENKNSEYSELEQEYQRISALIDAKFPQG--KSSLAEKLHKELIWDLDGVKYDEGISKRTALKKLEGKINEYTKKYSYLF |
1GO4 Chain:E ((494-547)) | ---------------------------------------------------------------------------SREEA---DTLRLKVEELEGERSRLEEEKRMLEAQLERRALQGDYDQSRTKVLHMSL------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1GO4.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 10258 for 169 contacts (60.7/contact) +
2D Compatibility (PS) -5559 + (NN) -745 + (LL) 8560
1D Compatibility (HY) -800 + (ID) 1000
Total energy: 10714.0 ( 63.40 by residue)
QMean score : 0.379
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