Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MDILIRGLSAQEVDYLKALAKETKAKSFNEFMLSMCREKIEKGQFNLVEANYLAHLENMKLTSDHVLRLTQKQTELLSDFALKMAQYADHISRWLEYEGEVESSD
2V4D Chain:A ((77-128))
------------------------------------------------EADYQSAQANLASTQEQ----AQRYKLLVADQAVSKQQYADANAAYLQSKAAVEQAR
General information:
TITO was launched using:
RESULT:
Template:
2V4D.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) 2820 for 302 contacts (9.3/contact) +
2D Compatibility (PS) -5672 + (NN) -3497 + (LL) 5096
1D Compatibility (HY) -800 + (ID) 800
Total energy: -2853.0 ( -9.45 by residue)
QMean score : 0.251
(partial model without unconserved sides chains):
PDB file :
Tito_2V4D.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2V4D-query.scw
PDB file :
Tito_Scwrl_2V4D.pdb
: