Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MTKEIKIRSIPEKTWAQLHMISEEYEYPSFNEFMLAQLQRIVENGGLDLYDNKFAETLAVIKEQQAQILDQLLKNE-------------IKLLAYHAKQDIVEELTTDWLRFMDDVDALAAERGAGGR
4XD1 Chain:A ((285-352))
----------------------------------------------IKLYSDNFDEILTACEDKSPEFISKLLKTENILFEKNHLGASPIIIAAYHGNMDVIEWLVSKGVNINDRNYKGTTVAMYFKD
General information:
TITO was launched using:
RESULT:
Template:
4XD1.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -7942 for 311 contacts (-25.5/contact) +
2D Compatibility (PS) -5855 + (NN) -4130 + (LL) 4016
1D Compatibility (HY) -5600 + (ID) 850
Total energy: -20361.0 ( -65.47 by residue)
QMean score : 0.271
(partial model without unconserved sides chains):
PDB file :
Tito_4XD1.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4XD1-query.scw
PDB file :
Tito_Scwrl_4XD1.pdb
: