Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MAEENAQQPSLRGKSRRERVEFARSRDILDVAHELNMELFRDGKNYRWKEHDSMVITPATNQWYWFSQRQGGDVIALVETIKEIGFNQAFEYLNEGTFKEFTVVNQVKEPFSYYLEPYEQLFVEARRYLKENRGLSDDTIDFFYDKGVLAQANAKVGDMIEPVLVFKNLDKNGQVVGAALQGLVAAPDKYFGRGYLKQIMKNSQPYNGMHVDIGTPNRLVFAESSIDLMSYYEIHKDSLSDVRLVSLEGLKTGTIGRHLIQLRAEMERRPLSSSWTDEILAQGLDEAVKQGYFKDGKNSHLLTLAVDNDVKGKQLIEELKDKSIPVIDATPPKAEGQSKMDWNAYLQETKATFSTEKYQEKIDHLISDVILGDETYYLWHDDELVNLGAGDSIIQAFHHQLEDRRYVINQAELYVEESSNDGATGYLSIEGHVLDKDGISDYLSDQALTDAEKVAFLETLQTELPDIWDEIVNHYDKVFEEVVVKYGLREKHADIIQEQELDLDPLVVPEAKEKSLEMNQETNTGGELFNRNSSFLGEDSPGTAPQPVEPTAQPDFPTNVRLHFTTDDGNMSNKAFRKNMRTLNLYANTMRDSAQWYLSEIADTTMSYVYKTPHEEGVQVLSVHFGKKNWMHLTGVTPVYENWVDSLSEQFIDDIANSKGHFKNLKFALGTPDKLKVLNLLPEIIESDTFVFNDLSSVQKLNNLDLSQALNPEDSDLLLLFRDEGLHQVPASLMRIKGDLEERLSHIDSGTVLGVYRERNGQLEQVSVNEEYVKDSGQEMLSILQNKHYEEALDSGQEMVQTDGFSAEDFTKVLDAVYHVGVPDDLARVPEGVLPVWQKYLEVSEENQWDLEQMIDYADKNSLLVKDSAFYKEWKEDMIYKNDYHVRLQFAENWDNGVELPFRTEQLIDYKTFVTGLYEANQAHHQRRQESQLPYTKTEFDIYAPGGQLIKDNVHYAIGDETRPVSQLMGLGYRRLPGYQELAVIDNSILSQLENKELNQEIASEANEHSLNSQEIPKEDNYPREAFTSPKQDIKKGLAQRVEEIVAEDATKILVSSIPQVQENLSVEGNLVGTPQADNRMLYTNLEDFGQDYQLELAVYSPKRVDFLEDVQAPWTLALIRKEKKIGYLAYGSDWAKEFQIEEELEHLAAQIGDEKVPEGLYKQAEVEAFIASHQGNESLQEPIPTIVAEPFDYTSASAYEISEHAFQKIREYTQSPEDLLEYMDFMSKFPQLSPRNVALIHEQWRGANAVATYEQWKAMGEALGIKPDDVVQTKATYVNKRTGETKEVVHQGLSVKTGEKSKITLFRPLMVKMIPVLDENGQQLKNDKGNPKYKKLSEASLQEKALVKDGK------LPVRQFQERDSKTGQPRFTTYKV---FELSQTTLKPGSYPKAMP----NRHFNFNVDKVKTKEVLEGLCDYAEKIGVSLMKDDAHVLDNAKGAFYSEEQLILINPNNTPGEKIATTIHELAHATLHNPKLEKQYKELPKGQKEFEAEMTSYLLSKHFGLDTSEKAIHYMASWTDNLKALEDKQLADSLKRVHQTVSKMLKQVEKYTNPHQLGRGKEHGLNFPKAPTKGSSR |
3J0J Chain:D ((275-373)) | --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------EEIPGRRGYPGYMYTDLATIYERAGVVEGKKGSVTQIPILSMPDDDRTHPIPDLTGYITEGQIQLSRELHRKGIYPPIDPLPSLSRLMNNGVGKGKTREDHKQVSDQLYSAYANGVDIRKLVAIIGEDALTENDRRYLQFADAFERFFINQGQQNRSIEESLQIAWALLSMLPQGELKRISKDHIGKYY------------------------------------------------------------------------------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 3J0J.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 39696 for 429 contacts (92.5/contact) +
2D Compatibility (PS) -9104 + (NN) -6051 + (LL) 93500
1D Compatibility (HY) -2800 + (ID) 1350
Total energy: 113891.0 ( 265.48 by residue)
QMean score : 0.296
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