Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MKQIKIITGLTVATLSAVVGNVYAEDITPTAPVNEPQVSSETAKTPQVTESQVNSAKVTADQAISDVNNQQIVVDEAQKQKDQSQQNLVKATSTVTEAEKVAAEATPEVVKEAIKAVTEAKEAVTDAEANVVDAQKTEQKANQEVQSQAKTVDENVKVVADKESEVKQ---------AEGVVTTAQEAIDSKTANTNASEAEKAVTEKQTKLETAETNLTEAQKQDAKIAEEKRLAEQEVVNKQLAVTDTQTLLKKLVTEINNEKVSTSLENQAYFNQRDGSWAGYYGNYTFAATGCVPSSLAMVFTELARRQITPTEIANYLWNNSNEFNKNYGGTSGKGLVQATKHFGFVPTHLASQSAIVEALQAGHHVLAAVQQDKFSPWGINYSHEIVLRGYSNGNTYVYDPYNRANIGWYPVANLWNEQSRDAIDTSSVGVPFFKITTQKMAQLEAQKAQVQSSLNTAKNQLAKTQDVLRTLEATPLKTPEAQAKLNQAKEALALAQADYTKAQEAVKLASQDLAVKEETLKNAQADLLTKQTALKDAQTVLVASQVKLADLKATLATVENNVKKAQATLTDAKAIVGQKQAKLLALQNAPKILADAQAKLVTAKNDLANKMAILDEAVAKLKSLQAVQAEAQKQYHVVFEAYKAVRDAKEQAKLAESYNHIIARGGEAIPVVDETDKITGYVDGSQKAVANEVTLALTSNGAPLESPVNKENQNVTKSSQALPHTGEAGLSILSVLGVGLISTLGLTSLKKRRPH |
1JCH Chain:A ((241-450)) | -----------VQTLSPGVTNNTDKDVRPAFGTQGGNTRDAVIRFPK--DSGHNAVYVSVSDVLSPDQ-----VKQRQDEENRRQQEW-DATHPVEAAERNYERARAEL---------------NQANEDVARNQERQAKAVQVYNSRKSELDAANKTLADAIAEIKQFNRFAHDPMAGGHRMWQMAGLKAQRAQTDVNNKQAAFDAAAKEKSDADAALSSAMESRKKKEDKKRSAENNLNDEKNKPRKGFKDYGHDYHPAPKTENIKGLGDLKPGIPKTPKQNGGGKRKRWTGDKGRKIYEWDSQHGELEGYRASDGQHLGSFDPKTGNQLKGPDPKRNIKKYL--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1JCH.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 89993 for 1125 contacts (80.0/contact) +
2D Compatibility (PS) -21541 + (NN) -7610 + (LL) 37244
1D Compatibility (HY) -800 + (ID) 2550
Total energy: 94736.0 ( 84.21 by residue)
QMean score : 0.327
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