Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKKVVFLKILVPLVSLVFLISLGITILAGVLGAVGGSQSNCTIEVVTSTSTDSSISSGDGSIDSFVKEHKEAYILSWKAGGFLPSASITQTMIENGFNFTNPNGTSLWQAHNMGGVKTSSKSNFPVTLATYGQDSVDLSGTKPGARVGDGTGGAYTWFSSYDAGIVGKAEFMAHQTLYTKAINNIDGIATLSAIADGGWATDGTYKTKLIDMYHKLGKTYEWLDKEAISAHGDKPYKATTASAGDAGLSDIFTSNSKDCSDSSSGGATDGTGTVPADAIAWGYRPDNLPESLKQYIIDPKSLGMAYANSSGWFNPGSDYLAGQCVNLTISLGNHLWGHSGSVSGNGKDQAGAWANIFGNSVKTTPKRGAIFSTQNGGGGYGHTGIVCHVFENGSILIVEQNTPLSGADYFKKSYTWNYRIWTPAQQKAEVISFAYPYGKEPKLGN |
| 3K3T Chain:A ((86-140)) | ----------------------------------------------------------------------------------------------------------------------------------------------------------FRAYDSYEQAFQDYADLVGNSPRYAKVAGKTDGHAFARALQEGGYATDPSYADKLARVINGNALRQRLMASAASA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 3K3T.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -5509 for 298 contacts (-18.5/contact) +
2D Compatibility (PS) -5759 + (NN) 859 + (LL) 13800
1D Compatibility (HY) -1600 + (ID) 850
Total energy: 941.0 ( 3.16 by residue)
QMean score : 0.069
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