Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MTDNRFAQLKENFEKGSPKRRVPTSRPIAAQKAPESYNKKGRYPFSLHQDVRYDKLEALVAYHGAKSASDYLERLIVQEWEKMQRKLKNKEK
2K9I Chain:A ((8-53))
-------------------------------------LNGIKLGVYIPQEWH-DRLMEIAKEKNL-TLSDVCRLAIKEYLDNHDKQKK----
General information:
TITO was launched using:
RESULT:
Template:
2K9I.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -9086 for 213 contacts (-42.7/contact) +
2D Compatibility (PS) -5074 + (NN) -3000 + (LL) 2352
1D Compatibility (HY) -2000 + (ID) 300
Total energy: -17108.0 ( -80.32 by residue)
QMean score : 0.415
(partial model without unconserved sides chains):
PDB file :
Tito_2K9I.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2K9I-query.scw
PDB file :
Tito_Scwrl_2K9I.pdb
: