Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKPSFKKLLLLFSIITILSIACTPHAKASGRSWKSWFIEQYFWLKRDKSYYKVQDESSFQKYLNASREQSDKGYYLDPNSVNGGLVQERLFDMQVYSWNDNGKANQKTIFYLAGGSYLNNPTPYHISMLKTLSTSLDAKIILPIYPKTPRYTYDYAIPRLVNLYRHFHE---KNANLTLMGDSAGGGLALGLAHALSHQSGQEAIPQPKNIILLSPWLDVTMKHPEIPKYEDTDPILSAWGLARVGEIWANGSNNTNHTYVSPKNAPATKLAPITLFTGTREIFFPDIRDYAAQLQAANHPVNYIAQEGMNHV----YPIYPIEEAKTAQYQMIDIINKTP |
| 3G9T Chain:A ((63-283)) | -----------------------------------------------------------------------------------------------------GCQAGKAILYLHGGGYVMGSINTHRSMVGEISRASQAAALLLDYRLAPEHPFPAAVEDGVAAYRWLLDQGFKPQHLSISGDSAGGGLVL----AVLVSARDQGLPMPASAIPISPWADMTCTNDSFKTRAEADPM--PGGINKMAARYLNGA-DAKHPYASPNFANLKGLPPLLIHVGRDEVLLDDSIKLDAKAKADGVKSTLEIWDDMIHVWHAFHPMLP--EGKQAIVRVGEFMREQW |
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General information:
TITO was launched using:
| RESULT:
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Template: 3G9T.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -103923 for 1855 contacts (-56.0/contact) +
2D Compatibility (PS) -22167 + (NN) -8938 + (LL) 7220
1D Compatibility (HY) -9200 + (ID) 3250
Total energy: -140258.0 ( -75.61 by residue)
QMean score : 0.528
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