Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MEKKLLRKEVLITLKSQPQAYKSEVDCKLLEAFIKTKAYQNSCVIATYLSFDYEYNTQLLIKQALCDGKRVLVPK-TYPKGKMIFVDYQKDN----LRATPFGLLEP----VNDRAVEKASIDLIHVPGLIFNNKGFRIGYGAGYFDRYLSDFEGDTISTIYRC-QRQDFVEEKHDVAVKEVLCL
3HXT Chain:A ((10-181))
--KRSLRGELKQRL--MSAEERLRQSRVLSQKVIAHSEYQKSKRISIFLSMQDEIETEEIIKDIFQRGKICFIPRYRFQSNHMDMVRIESPEEISLLPKTSWNIPQPGEGDVREEALSTGGLDLIFMPGLGFDKHGNRLGRGKGYYDAYLK-----------RCLQHQEVKPYTLALAFKEQICL
General information:
TITO was launched using:
RESULT:
Template:
3HXT.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -72262 for 1136 contacts (-63.6/contact) +
2D Compatibility (PS) -17320 + (NN) -3570 + (LL) 836
1D Compatibility (HY) -10800 + (ID) 2600
Total energy: -105716.0 ( -93.06 by residue)
QMean score : 0.462
(partial model without unconserved sides chains):
PDB file :
Tito_3HXT.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3HXT-query.scw
PDB file :
Tito_Scwrl_3HXT.pdb
: