Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MSYEQEFLK-DFEEWLQSQISINQMAMDSAKKVLEE---DKDERAADAYIRYESKLDAYRFLQGKFNNYHNQKSFHDLPDGLFGQRHY
2V95 Chain:A ((118-167))
--YESEALAIDFEDWTKASQQINQHVKDKTQGKIEHVFS--DSPASFILVNYIFLRGIWELPFSPENTREEDFYVNETSTVKVPMMVQ
General information:
TITO was launched using:
RESULT:
Template:
2V95.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -5510 for 199 contacts (-27.7/contact) +
2D Compatibility (PS) -4391 + (NN) 819 + (LL) 168
1D Compatibility (HY) -1200 + (ID) 800
Total energy: -10914.0 ( -54.84 by residue)
QMean score : 0.210
(partial model without unconserved sides chains):
PDB file :
Tito_2V95.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2V95-query.scw
PDB file :
Tito_Scwrl_2V95.pdb
: