Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MTNPTFGEKIDNVDYRSRFGVYAIIPNPTHDKIILVQAPN-----GAWFLPGGEIEENENHLEALTRELIEELGYSATIGHYYGQADEYFYSRHRDTYYYNPAYIYEVTAYHKEQAPLEDFNHLAWFPIQEAKEKLKRGSHRWGVQAWEKNHHSRK
3GRN Chain:A ((9-95))
------------------ISVYALIRNEKGEFLLLRRSENSRTNAGKWDLPGGKVNPDESLKEGVAREVWEETGITMVPGDIAGQVNFELTEKKVIAIVFDGGYVVADVKLSYEHIEYSWVSLEKILGMETLPAYFRDFFERFDRENKK-------
General information:
TITO was launched using:
RESULT:
Template:
3GRN.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -37757 for 524 contacts (-72.1/contact) +
2D Compatibility (PS) -8956 + (NN) -6296 + (LL) 1368
1D Compatibility (HY) -5600 + (ID) 1200
Total energy: -58441.0 ( -111.53 by residue)
QMean score : 0.322
(partial model without unconserved sides chains):
PDB file :
Tito_3GRN.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3GRN-query.scw
PDB file :
Tito_Scwrl_3GRN.pdb
: