Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MKRKQFIKLGIATLLTVISLYTPINLATNHTTENIVTAQEYKTKENGTLPFKHKRQLVLGELDDKGRATFAHIQLKVKDEPKKKRVKRLKTT-------PVGWHNFKFYYNDGTQKAWLMSRGRLICH----QFSGLNNERKNLVPMTNWLNTGNYNSTNSSNPESMLFYEKQLKTWLSTHKNYYLDYKVTPIYQNN-ELIPRKIELKYVGIDKTGKLLPIFIGNKSTQDQFGISTVTLENTSPNATIDYLSGKAQNTVLSAKEQRKLIAKHEEEKRLAEKKVEEEKAAAETQKKLEEEQARLAAEAQRKQKEEQARLAAETQKKQETLVQEQTSQGYKRDYRGRWHRPNGQYASKAEIAAAGLQW |
4QH0 Chain:A ((53-221)) | ---------------------------------------------------------VQNTIDNQQRPSTANAML---DRTIRQYQNRRDTTLPDANWKPLGWH--QVATNDHYGHA--VDKGALIAYALAGNFKGWDASVSN--PQNVVTQTAHSNQSNQKINRGQNYYESLVRK--AVDQNKRVRYRVTPLYRNDTDLVPFAMHLEAKSQDGTLEF-----------------NVAIPNTQASYTMDYATGEITLN------------------------------------------------------------------------------------------------------------ |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 4QH0.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -2165 for 1203 contacts (-1.8/contact) +
2D Compatibility (PS) -17035 + (NN) -7347 + (LL) 16896
1D Compatibility (HY) -4000 + (ID) 2350
Total energy: -16001.0 ( -13.30 by residue)
QMean score : 0.416
|
|
|