Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MSDIKILALDLDGTLFTTDKKVSEENKVALKAAREKGIKVVITTGRPLKAIGNLLEDLELVSDEDYSITFNGGLVQQNTGKILAKTAMTRQEVEDIHEELYQVGLPTDILSEGTVYSIANKGHHSQYHLANPLLE-----FIEVDDLEQVPKDVVYNKIVSV-IDATYLDQQIAKLPDRLKVDYEMFKSRDII------LELMPKGVHKAVGLELLTKHLGLDSSQVMAMGDEANDLSMLEWAGLGVAMANGIPEAKAIAKATTICNNDESGVAEAIGKYILSEEN |
| 3DNP Chain:A ((7-278)) | ----QLLALNIDGALLRSNGKIHQATKDAIEYVKKKGIYVTLVTNRHFRSAQKIAKSLKL---DAKLITHSGAYIAEKIDAPFFEKRISDDHTFNIVQVLESYQCNIRLLHEK--YSIGNKKKVNSNLLGKALIHPSDPIFYPVQFVESL-SDLLMDEPVSAPVIEVYTEHDIQH--DITETITKAFPAVDVIRVNDEKLNIVPKGVSKEAGLALVASELGLSMDDVVAIGHQYDDLPMIELAGLGVAMGNAVPEIKRKADWVT-RSNDEQGVAYMMKEYFRMQQR |
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General information:
TITO was launched using:
| RESULT:
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Template: 3DNP.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -104154 for 2211 contacts (-47.1/contact) +
2D Compatibility (PS) -27999 + (NN) -8937 + (LL) 740
1D Compatibility (HY) -19600 + (ID) 4100
Total energy: -164050.0 ( -74.20 by residue)
QMean score : 0.445
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