Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MIELGITTFGETTILEETNQSYSHPERIRQLVAEIELADQVGLDVYGIGEHHREDFAVSAPEIVLAA---GAVRTNNIRLSSAVTILSSNDPIRVYQQFSTIDALSNGRAEIMAGRGSFIESFPLFGYDLADYDDLFNEKMDMLLAINSATNLDWKGHLTQTVNERPIYPRA-------LQRQLPIWVATGGNVDSTIRIAEQGLPIVYATIGGNPKAFRQLVHIYKEVGSRNGHKPEQLKVAAHSWGWIEEDNQTAID--------------------RYFFPTKQTVDNIAKGRPHWSEMTKEQYLRSVGPEGAIFVGSPEVVAHKIIGLVEALELDRFMLHLPVGSMPHKDVLNAIKLYGKEVAPIVRKYFEKN |
| 1LUC Chain:A ((16-353)) | ----------------------SQTEVMKRLVNLGKASEGCGFDTVWLLEHHFTEFGLLGNPYVAAAHLLGATETLNV--GTAAIVLPTAHPVRQAEDVNLLDQMSKGRFRFGICRGLYDKDFRVFGTDMDNSRALMDCWYDLM---KEGFN---EGYIAAD-NEHIKFPKIQLNPSAYTQGGAPVYV-VAESASTTEWAAERGLPMILSWIINTHEKKAQL-DLYNEVATEHGYDVTKIDHCLSYITSVDHDSNRAKDICRNFLGHWYDSYVNATKIF------------------------RIDYSYEINP-----VGTPEECIAIIQQDIDATGIDNICCGFEANG-SEEEIIASMKLFQSDVMPYLKEKQ--- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1LUC.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -105364 for 2183 contacts (-48.3/contact) +
2D Compatibility (PS) -29318 + (NN) -4311 + (LL) 5648
1D Compatibility (HY) -14800 + (ID) 3500
Total energy: -151645.0 ( -69.47 by residue)
QMean score : 0.442
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