Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MAIILPDLPYAYDALEPHIDAETMTLHHDKHHATYVANANAALEKHPEI-GEDLEALLADVSQIPEDIRQAVINNGGGHLNHALFWELMSPEET-QISQELSEDINATFGSFEDFKAAFTAAATGRFGSGWAWLVVNAEGKLEVLSTANQDTPIMEGKKPILGLDVWEHAYYLNYRNVRPNYIKAFFEIINWNKVNELYQAAKA
1JR9 Chain:A ((5-201))
----LPELPYAYDALEPTIDKETMNIHHTKHHNTYVTKLNGALEGHEDLKNKSLNDLISNLDAVPENIRTAVRNNGGGHANHSLFWKLMSPNGGGKPTGEVADKINDKYGSFEKFQEEFAAAAAGRFGSGWAWLVVN-NGEIEIMSTPIQDNPLMEGKKPILGLDVWEHAYYLKYQNKRPDYISAFWNVVNWDEVAAQYSQAA-
General information:
TITO was launched using:
RESULT:
Template:
1JR9.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -98890 for 1538 contacts (-64.3/contact) +
2D Compatibility (PS) -20423 + (NN) -6982 + (LL) 968
1D Compatibility (HY) -21600 + (ID) 5850
Total energy: -152777.0 ( -99.33 by residue)
QMean score : 0.555
(partial model without unconserved sides chains):
PDB file :
Tito_1JR9.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1JR9-query.scw
PDB file :
Tito_Scwrl_1JR9.pdb
: