Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MNTNDFDFYLPEELIAQTPLEKRDASKLLVIDHKNKTMTDSHFDHILDELKPGDALVMNNTRVLPARLYGEKPDTHGHIELLLLKNTEGDQWEVLAKPAKRLRVGTKVSFGDGRLIATVTKELEHGGRIVEFSYDGIFLEVLESLGEMPLPPYIHEKLEDRDRYQTVYAKENGSAAAPTAGLHFTKELLEKIETKGVKLVYLTLHVGLGTFRPVSVDNLDEHEMHSEFYQLSKEAADTLNAVKESGGRIVAVGTTSIRTLETIGSKFNGELKADSGWTNIFIKPGYQFKVVDAFSTNFHLPKSTLVMLVSAFAGRDFVLEAYNHAVEERYRFFSFGDAMFVK |
| 2NV2 Chain:B ((141-191)) | -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------EAGENVEVLSEHNGRIVAA-----KQGQFLGCSFNPELTEDHRVTQLFVEMVEEYKQK--------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2NV2.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -4234 for 259 contacts (-16.3/contact) +
2D Compatibility (PS) -4863 + (NN) 3238 + (LL) 19504
1D Compatibility (HY) -3600 + (ID) 850
Total energy: 9195.0 ( 35.50 by residue)
QMean score : 0.147
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