Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MTNHKTKKLTVLAIMIALDVFLTPIFRIEGMAFMSSVVNIIAGVIMGPIYALVMALVTAFIRILTQAGVASVAPLAILGAGPGAFLAGWLYQFYAKDWMSWVGEFIGTGIIGALLSAPIMVWFWTWTADGNHEVLAKASAAQSIFLFMPRFIGATIIGGVIALLLLQGLKRVPVFMTIQALFKGEKVK |
4UZJ Chain:A ((124-147)) | -----------------------------------------------------------------------------------------------------------------------------------------------------RFMGALILRQVIAELIPVGLGRVPGGELMLVGSSAGGMG |
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General information:
TITO was launched using:
| RESULT:
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Template: 4UZJ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -7778 for 93 contacts (-83.6/contact) +
2D Compatibility (PS) -2398 + (NN) -322 + (LL) 13788
1D Compatibility (HY) -3200 + (ID) 700
Total energy: -610.0 ( -6.56 by residue)
QMean score : 0.012
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