Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MKIKKLLGLTTTVVISALILGACGQSKNEDAKVVRVGTMVKSKTEKARWDKIEELVKKK-GVKLKFTEFTDYTQPNKALESDEIDINAFQHYNYLNNWNKANKTNLVSVAETYFTSFRLYSGTKNGKGKYQTVSEIPNKATITIPNDAVNESRSLYLLQSAGLLKLKV---SGDTLATMSDVVSNPKSLDLKEVDAAQTARSLDSTDAAVINNDFVTEAGINP-KSAIFIEPKSKNAKQWYNLLVAQKGWQDKSKAKAIKEVVKAYHTDAVKKVIEKTSQGLDQPVW |
4QHQ Chain:A ((1-235)) | --------------------------------VIKVGTVAGPDSE--VWQVVQKVAKEKEGLNVKVIEFNDYVQPNAALDSGDLDANSFQHQPYLDSQVKQRGYKIVSAGLTYISPIGVYS------KKFKSLKDLPQGAKLAVPNDPSNENRALLLLQTQGVIKLKAGAGTGGNNATVLDIAENPKKLKISELDAAQLPRVLSDVDAAVINTNYALAANLQPTKDAIALESLT---SPYANLIAVRAKDKDQP---WVKKLVKAYQSPEVKEFIKKQFKGSMVASF |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 4QHQ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -59070 for 1929 contacts (-30.6/contact) +
2D Compatibility (PS) -24600 + (NN) -8805 + (LL) 2908
1D Compatibility (HY) -17200 + (ID) 4550
Total energy: -111317.0 ( -57.71 by residue)
QMean score : 0.450
|
|
|