Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MLRSKFDEELDKLHNQFYAMGIEAIGQIKKTVRAFVSHDRELAKEVIEDDVTLNNFETKLEKKSLEIIALQQPVSQDLRTVITVLKATSDVERMGDHAAAVAKATIRMKGEERI-PAVELEINNMGKAVKNMLEEALTAYINGDDEKAYEVAAMDEIVDDYFRDIQKMVVETIQKHPDVAFAAKEYFQVLMHLERIGDYGKNICEWIVYLKTGKIIEL
1T8B Chain:A ((8-214))
----KLFKELEETKEQVIKMAKLVQEAIDKATEALNKQNVELAEEVIKGDDTIDLLEVDIERRCIRMIALYQPEAGDLRMIMGIYKIVSDLERMGDEAENIAERAILLAEEPPLKPYV--NINFMSEIVKEMVNDSVISFIQQDTLLAKKVIEKDDTVDELYHQLERELMTYVLEDPRNIKRAMHLSFVARHYERIADHAENVAEAAIYLSEG-----
General information:
TITO was launched using:
RESULT:
Template:
1T8B.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -78271 for 1689 contacts (-46.3/contact) +
2D Compatibility (PS) -22654 + (NN) -14503 + (LL) 1488
1D Compatibility (HY) -13200 + (ID) 3300
Total energy: -130440.0 ( -77.23 by residue)
QMean score : 0.607
(partial model without unconserved sides chains):
PDB file :
Tito_1T8B.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1T8B-query.scw
PDB file :
Tito_Scwrl_1T8B.pdb
: