Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MATIKEIKAILETIVDLKDKRWQEYQTDSRAGVQKAILQRKKNIQSDLDEEARLEQMLVYEKKLYIEHINLIAGIDEVGRGPLAGPVVAAAVILPPNCKIKHLNDSKKIPKKKHQEIYQNILDQALAVGIGIQDSQCIDDINIYEATKHAMIDAVSHLSVAPEHLLIDAMVLDLSIPQTKIIKGDANSLSIAAASIVAKVTRDKIMSDYDSTYPGYAFSKNAGYGTKEHLEGLQKYGITPIHRKSFEPIKSML
4HHT Chain:A ((4-191))
--------------------------------------------------------------ELYKKEFGIVAGVDEASRGCLAGPVVAAAVVLEK--EIEGINDS---------RLLDEIMEKA-AVGIGIASPEEIDLYNIFNATKLAMNRALENLSVKPSFVLVDGKGIELSVPGTCLVKGDQKSKLIGAASIVAKVFRDRLMSEFHRMYPQFSFHKHKGYATKEHLNEIRKNGVLPIHRLSFEPVLELL
General information:
TITO was launched using:
RESULT:
Template:
4HHT.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -124552 for 1530 contacts (-81.4/contact) +
2D Compatibility (PS) -19168 + (NN) -3454 + (LL) 6860
1D Compatibility (HY) -19200 + (ID) 4500
Total energy: -164014.0 ( -107.20 by residue)
QMean score : 0.477
(partial model without unconserved sides chains):
PDB file :
Tito_4HHT.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4HHT-query.scw
PDB file :
Tito_Scwrl_4HHT.pdb
: