Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MMDFYIKQIIIHQFSPNDTELVLSDTPLTLTPRIDDYFRKKLSKVFSDEAKRGYFGEDNVFMSHLQDDLYVSSCQIAQLWKEEFVISEDQKTNDLVFIQFDKDGMEHFAFLRISLKEQFAHVSENQEQPITITQNNLPSAAQTPDEALVVNKSSKQYYLIEKRIKHNGSFANYFSENLLQVQPEQSVKKSIKMVEQTAQKIAENFNKDDFSFQSKMKSAIYKNLEEEQELSPEKLADQLFDDNLTARLTFVDELKDAIPGPVQVSDIDHSRQIKKLENQKLSLSNGIELIVPNNVYQDAESVEFIQNPDGTYSILIKNIQDIQNK |
| 1Y4S Chain:A ((414-483)) | ----------------------------------------------------------------------------------------------------------------VSLEDYVSRMKEGQEKIYYITADSYAAAKSSPHLEL-LRKKGIEVLLLSDRI--DEWMMNYLTE--FDGKPFQSV------------------------------------------------------------------------------------------------------------------------------------------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 1Y4S.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 10623 for 398 contacts (26.7/contact) +
2D Compatibility (PS) -7269 + (NN) -1794 + (LL) 18104
1D Compatibility (HY) -7200 + (ID) 1050
Total energy: 11414.0 ( 28.68 by residue)
QMean score : 0.198
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