Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MCAFFKTDTLKSCAIDQNAGSKKSATLQIARRVKKGIGDFPK-TEK--GNSLIVGYPQ-IGLSPFLFSHVSGHVLRLPENKSTELWEDCQILNKGHCVEMRK
1JNR Chain:B ((114-143))
-----------------------------------PFEGFPEPTEEALKSELLAGEPEIIGTSEFPQVKKKA------------------------------
General information:
TITO was launched using:
RESULT:
Template:
1JNR.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -3854 for 90 contacts (-42.8/contact) +
2D Compatibility (PS) -2884 + (NN) -3023 + (LL) 4556
1D Compatibility (HY) -1200 + (ID) 550
Total energy: -6955.0 ( -77.28 by residue)
QMean score : 0.489
(partial model without unconserved sides chains):
PDB file :
Tito_1JNR.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1JNR-query.scw
PDB file :
Tito_Scwrl_1JNR.pdb
: