Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MIDTFKVKWFKRGMSLLVLILVFFLGLGFGQMGNSSQSKDRPKQTATKKTRTNTITQTQVKEFLVAYYTKKDLEENRNRYKDYMTEGL-----YNATISEENKAQNQAYRGF-VVNFEFQDANIYIDQVHKQVICEVTYTNDLLQKKNNKDGAQIGVVNHTTIQLAYTKLNGKYLINQMSTILLTDSANPSEETESYGAIAPSNTKD |
4MRD Chain:A ((17-82)) | --------------------------------------------------------------------------EKNGRYSISRTEAADLCQAFNSTLPTMDQMKLALSKGFETCRYGFIEGNVVIPRIHPNAICAANHTGVYILVTSNTSHYDTYCFNASAPPEEDCTSVTDLPNSFDGPVTITIVNRDGTRYSKKGEYRTHQEDI |
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General information:
TITO was launched using:
| RESULT:
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Template: 4MRD.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 9207 for 305 contacts (30.2/contact) +
2D Compatibility (PS) -6142 + (NN) 2040 + (LL) 5740
1D Compatibility (HY) -2000 + (ID) 800
Total energy: 8045.0 ( 26.38 by residue)
QMean score : -0.001
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