Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MTYQEALEWIHSKLAFGIKPGLERMRWMLEQLGNPQNNLSAIHVVGTNGKGSTTSYLQHIFTNSGYQVGTFTSPYIVDFRERISIDGQMIPESDFIKLVETVRPVVERLHLETNLEPATEFEVITVLMFYYFGNSCPVDIVIIEAGMGGYYDSTNMFKALAVTCPSIGLDHQEVLGRTYVDIAEQKVGVLKKGVPFVYANDRQDVEEVFQIKAKETHSQTYRLHNDFYIKEEE-----NYFNYIGPQANIDHIQLQMPGHHQVSNASIAITTSLLL--RDKYPKLTLQTIKDGLEMTKWVGRTELI--FPNVMIDGAHNNESVDALVQVIKKYQQKNVHILFAAINTKPIESMLESLSS------IAPVSVTSFDYPKSINLDKYPKAYTRVSD-WKKWL-HDINLTSDKDFYVITGSLYFISQVRQELLLIKTTTT |
| 2GCB Chain:A ((1-424)) | MNYTETVAYIHSFPRLAKTGDHRRILTLLHALGNPQQQGRYIHVTGTNGKSTAANAIAHVLEASGLTVGLYTSPFIMRFNERIMIDHEPIPDAALVNAVAFVRAALERLQQQQADFNVTEFEFITALGYWYF-RQRQVDVAVIEVGIGGDTDSTNVITPVVSVLTSVALDHQKLLGHTITAIAKHKAGIIKRGIPVVTGNLVPDAAAVVAAKVATTGSQWLRFDRDFSVPKAKLHGWGQRFTYEDQDGRISDLEVPLVGDYQQRNMAIAIQTAKVYAKQTEWP-LTPQNIRQGLAASHWPARLEKISDTPLIVIDGAHNPDGINGLITALKQLFSQPITVIAGIL-------MADRLTAAFSTVYLVPVPGT----PRAL----------RLKDSWQEALAASLNDVPDQPI-VITGSLYLASAVRQTLLG------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 2GCB.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -263157 for 3359 contacts (-78.3/contact) +
2D Compatibility (PS) -41269 + (NN) -9180 + (LL) 1268
1D Compatibility (HY) -28000 + (ID) 7250
Total energy: -347588.0 ( -103.48 by residue)
QMean score : 0.482
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