Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MTKLATICYIDNGKELLLLHRNKKENDVHEGKWISVGGKLEAGETPDECAKREILEETHLTVKKMDFKGVITF-----PEFTPGHDWYTYVFKVTDYEGELISDDESREGTLEWVPYDQVLSKPTWQGDYEIFKWILEDVPFFSAKFVYDEHQNLIEKTVNFYEK
3ZR1 Chain:A ((4-133))
-SRLYTLVLVLQPQRVLL---GMKKRGFGAGRWNGFGGKVQEGETIEDGARRELQEESGLTVDALHKVGQIVFEFVGEPELMDVH-----VFCTDSIQGTPVESDEMRPC---WFQLDQIPFKDMWPDDSYWFPLLLQKKKFHGYFKFQGQDTILDYTLREVDTV
General information:
TITO was launched using:
RESULT:
Template:
3ZR1.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -32048 for 934 contacts (-34.3/contact) +
2D Compatibility (PS) -13552 + (NN) -6428 + (LL) 1176
1D Compatibility (HY) -9600 + (ID) 2100
Total energy: -62552.0 ( -66.97 by residue)
QMean score : 0.416
(partial model without unconserved sides chains):
PDB file :
Tito_3ZR1.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3ZR1-query.scw
PDB file :
Tito_Scwrl_3ZR1.pdb
: