Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MVKKFAFAKGIATGVVA--T-------AATLAGAAFAIKKTIIE---PEEEKIAFIEENRKKAARKRVSH
3EWM Chain:A ((248-305))
-----AFMAALLVGILKLKGLDLLKLGKFANLVAALSTQKRGAWSTPRKDELLKYKEAREVLA-------
General information:
TITO was launched using:
RESULT:
Template:
3EWM.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) 13433 for 256 contacts (52.5/contact) +
2D Compatibility (PS) -4564 + (NN) -1533 + (LL) 1376
1D Compatibility (HY) 800 + (ID) 400
Total energy: 9112.0 ( 35.59 by residue)
QMean score : -0.163
(partial model without unconserved sides chains):
PDB file :
Tito_3EWM.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3EWM-query.scw
PDB file :
Tito_Scwrl_3EWM.pdb
: