Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MYQRIRDLREDHDFTQRYVAEVLSFSHTNYAKIERGEVVLTADVLIKLSKLYNVSTDYILGLTDYPHKINFKK
2R1J Chain:L ((6-65))
MGERIRARRKKLKIRQAALGKMVGVSNVAISQWERSETEPNGENLLALSKALQCSPDYLLKGD----------
General information:
TITO was launched using:
RESULT:
Template:
2R1J.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -48877 for 416 contacts (-117.5/contact) +
2D Compatibility (PS) -6622 + (NN) -1643 + (LL) 164
1D Compatibility (HY) -3600 + (ID) 900
Total energy: -61478.0 ( -147.78 by residue)
QMean score : 0.574
(partial model without unconserved sides chains):
PDB file :
Tito_2R1J.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2R1J-query.scw
PDB file :
Tito_Scwrl_2R1J.pdb
: